Patents
- Sonja Zillner. Apparatus for the Semantic-based optimization of production facilities with explainability, European Patent, 19162593.3, 2019
- Sonja Zillner. Method and system for automated exchange of data, European Patent, 18203864.6, 2018
- Sonja Zillner. Method and apparatus for providing an instantiated industrial semantic model for an industrial infrastructure, European Patent, 18161497.5, 2018
- Sonja Zillner and Andreas Hölzl. A method for computer-implemented determination of a data-driven prediction model, European Patent, 17196409.1, 2017 & US Patent 16156059 2019
- Sonja Zillner, Martin Schneider. System and method for the maintenance of an industrial plant, German patent DE102015221313, 2017 and US Patent 15770768, 2018.
- Sonja Zillner. System and Method for Data Analyzing of Heath-Related Data, US Patent US2016371457, 2016
- Claudia Bretschneider, Heiner Oberkampf, Sonja Zillner. Method and Apparatus for Generating a Knowledge Data Model, US Patent US2016335544, 2016
- Ebel Alexander, Martin Schneider, Sonja Zillner. Method and System for providing Data Analytics Results, US2016092820, 2016
- Heiner Oberkampf, Claudia Bretschneider, Sonja Zillner, Method and System for Extracting Measurement-Entity relations, US Patent US2015178386, 2015
- Ulli Waltinger, Sonja Zillner. Method and System for Supporting a Clinical Diagnosis. US Patent US2015178386, 2015
- Sonja Zillner, Claudia Bretschneider. Extending Concepts Lables of an Ontology. US Patent US2015095013, 2015
- Sonja Zillner, Heiner Oberkampf. Method for Composing an Integrated Ontology, US Patent US2015081648, 2015
- Stephan Grimm, Sonja Zillner. System and Method for Handling Plant Engineering Data, US Patent US2014297230, 2014
- Sonja Zillner. Method and System for Supporting and Acquisition of Clinical Data, Us Patent US2014288964, 2014
- Claudia Bretschneider, Sonja Zillner. Method for Processing Medical Reports, US Patent US2014081623, 2014
- Heiner Oberkampf, Sonja Zillner. Method and System for Supporting Clinical Diagnosis. US Patent 20130310653, 2012
- Sonja Zillner. System and Method for Composing a Medical Image Analysis, US Pa-tent 20130011027, 2011
- Sonja Zillner. A method of composing an ontology alignment. US patent 20120330974. 13/168,237, 2011
- Sonja Zillner, Michal Skubacz. A method of administering a knowledge repository. US patent 13/205,135, 2011
- Sonja Zillner, Michal Skubacz. Method and system for retrieving information. US patent 13/108,653, 2011
- Sonja Zillner. A system and method for providing instance information data of an in-stance. US Patent 12/846,932, 2010
- Pinar Wennerberg, Sonja Zillner. Method and an apparatus for providing at least one configuration data ontology module. US Patent 20110016130, 2009
- Martin Huber, Alexey Tsymbal, Sonja Zillner. Method and an apparatus for retrieving additional information regarding a patient record. US Patent 20100094874, 2009
- Paul Buitelaar, Pinar Wennerberg, Sonja Zillner. Method and Apparatus for processing semantic data resources. US Patent 20090313243, 2008
- Huber Martin, Alexey Tsymbal, Sonja Zillner. Medical Ontologies for Machine Learning and Decision Support http://patents.justia.com/patent/20080201280. US Pa-tent 20080201280, 2007
- Saikat Mukherjee, Shaohua Kevin Zhou, Xiang Zhou, Martin Huber, Jorg Freund, Volker Tresp, Sonja Zillner, Alok Gupta, Dorin Comaniciu. Scalable Semantic Image Search. US Patent 20080027917, 2007
Books
- S. Zillner und B. Krusche: Systemisches Innovationsmanagement. Grundlagen – Strategien – Instrumente. Schäffer-Pöschl Verlag, Stuttgart, 2012
- S. Zillner: Semantic Access to Multimedia Content – The Ontology-Enhanced Querying and Management of Multimedia Meta Objects; VDM Verlag, 2008
Journals
- D. Sonntag, M. Huber, M. Möller, A. Ndiaye, S. Zillner, A. Cavallaro: Design and Im-plementation of a Semantic Dialogue System for Radiologists. CoRR abs/1701.07381, 2017
- H. Oberkampf, et al. “Semantic Representation of Radiology Findings for Better Decision Making”, in: BMC Medical Informatics and Decision Making, 2016
- S. Zillner and S. Neurer. Technology Roadmap Development for Big Data Healthcare-applications, in: German Journal on Artificial Intelligence, 2015
- S. Zillner, D. Sonntag: „Image Metadata Reasoning for Improved Clinical Decision Support”, in: Springer Journal “Network Modeling and Analysis in Health Informatics and Bioinformatics” (NetMAHIB), 2012
- P. Wennerberg, S. Zillner, K. Schulz. “Context Driven Modularization of a Representation of Human Anatomy”, in: Journal AMIA Summit on Translational Bioinformatics 2010, San Francisco, March, 2010
- S. Zillner, M. Huber. “Intelligent Medical Image Search“, in: IT – Information Technology 51 – 5, Oldenburg Wissenschaftsverlag, Oktober 2009
- D. Sonntag, P. Wennerberg, P. Buitelaar, S. Zillner: “Pillars of Ontology Treatment in the Medical Domain”, in: Journal of Cases on Information Technology (JCIT), Vol. 11, Issue 4, IGI Global, 2009
- S. Zillner and W. Winiwarter: “EMMA – A Formal Basis for Querying Enhanced Multimedia Meta Objects”, in: Journal on Data Semantics IV, 2005
- S. Zillner and W. Winiwarter: “Integrating Ontology Knowledge Within the Authoring and Retrieval of Multimedia Meta Objects”, in: International Journal of Web and Grid Services (IJWGS), 4, 2005
Conferences
- U. Hohenstein, A. Biesdorf, S. Zillner: Architectural Considerations for a Data Access Marketplace, in: Proceedings of the 7th International Conference on Data Science, Technology and Applications DATA, Porto, Portugal, July 2018
- C. Bretschneider, S. Zillner, M. Hammon, P. Gass, D. Sonntag: Automatic extraction of breast cancer information from clinical reports. In Proceedings of 30th International Symposium on Computer-Based Medical Systems, Thessaloniki, Greece, June 2017
- M. Barz, P. Poller, M. Schneider, S. Zillner, D. Sonntag: Human-in-the-Loop Control Processes in Industry 4.0 Factories. In Proceedings of 8th International Conference on Industrial Applications of Holonic and Multi-Agent Systems (HoloMAS2017), Lyon, France, August 2017
- D. Panfilenko, P. Poller, D. Sonntag, S. Zillner, M. Schneider: BPMN for Knowledge Acquisition and Anomaly Handling in CPS for Smart Factories, in: Proceedings of the IEEE International Conference on Emerging Technology & Factory Automation to be held in Berlin, Germany (ETFA 2016), September 6 – 9, 2016
- S. Zillner, A. Ebel, M. Schneider: Towards intelligent manufacturing, semantic modeling for the steel industry, in: Proceedings of the 17th IFAC Symposium on Control, Optimization and Automation in Mining, Mineral and Metal Processing, Vienna, Austria, 2016
- C. Bretschneider, H. Oberkampf, S. Zillner: UIMA2LOD: Integrating UIMA Text An-notations into the Linked Open Data Cloud. In proceedings of the International Conference on Knowledge Engineering and Semantic Web. Moscow, Russia, 2015 (First Pa-per Award)
- C. Bretschneider, S. Zillner: Semantic Splitting of German Medical Compounds, in: P. Král and V. Matoušek (editors): Lecture Notes in Computer Science – Text, Speech, and Dialogue, Springer International Publishing, 2015
- H. Oberkampf, T. Gojayev, S. Zillner, D. Zühlke, S. Auer, M. Hammon: ”From Symptoms to Diseases – Creating the Missing Link”, in: Proceedings of the 12th Extended Semantic Web Conference (ESWC 2015), Portoroz, Slovenia, June 2015
- D. Sonntag, V. Tresp, S. Zillner, A. Cavallaro, M. Hammon, A. Reis, P. Fasching, M. Sedlmayr, T. Ganslandt, H.-U. Prokosch, K. Budde, D. Schmidt, C. Hinrichs, T. Wit-tenberg, P. Daumke, und G. Patricia: “The Clinical Data Intelligence Project”, in: Journal Informatik-Spektrum, Springer Verlag, 2015
- S. Zillner, H. Oberkampf, C. Bretschneider, A. Zaveri and S. Neururer: Towards a Roadmap for Big Data Applications in the Healthcare Domain. In Proceeding of 12th IEEE International Conference on Information and Integration (IEEE IRI HI), San Francisco. USA, August 2014
- C. Bretschneider, H. Oberkampf, S. Zillner, B. Bauer and M Hammon: Corpus-based Translation of Ontologies for Improved Multilingual Semantic Annotation, in: Proceedings of the Workshop Semantic Web and Information Extraction Workshop (SWAIE 2014), Dublin, Ireland, August 2014
- H. Oberkampf, C. Bretschneider, S. Zillner, B. Bauer, M. Hammon: ”Knowledge-based Extraction of Measurement-Entity Relations from Radiology Reports”, in: Proceedings of the IEEE International Conference on Healthcare Informatics 2014 (ICHI 2014, Verona, Italy, September 2014
- S. Zillner, N. Lasierra, W. Faix, and S. Neururer: User Needs and Requirements Analysis for Big Data Healthcare Applications, in: Proceeding of the 25th European Medical Informatics Conference (MIE 2014), Istanbul, Turkey, September 2014
- D. Sonntag, S. Zillner, S. Chakraborty, A. Lorincz, E. Strömmer, L. Serafini: The Med-ical Cyber-Physical Systems Activity at EIT: A Look under the Hood, in: Proceedings of the 27th International Symposium of Computer-Based Medical Systems (IEEE CBMS 2014), New York, USA, May 2014
- S. Zillner, A. Ebel, M. Schneider, L.Abele, G. Mathis, N. Goldenberg: A semantic modelling approach for the steel production domain, in: Proceedings of the 1st Europe-an Steel Technology & Application Days (ESTAD), Paris, France, April 2014 (forth-coming)
- V. Tresp, S. Zillner, M. J. Costa, Y. Huang, et al.: Towards a New Science of a Clinical Data Intelligence, in: Proceedings of the NIPS Workshop on Machine Learning for Clinical Data Analytics and Healthcare, Lake Tahoe, Nevada, USA, December 2013
- C. Bretschneider, S. Zillner, M. Hammon: „Grammar-based lexicon enhancement for aligning German radiology text and images”, in: Proceedings of the Recent Advances in Natural Language Processing (RANLP 2013), Hissar, Bulgaria, September 2013
- C. Bretschneider, S. Zillner, M. Hammon: „Identifying pathological findings in Ger-man radiology reports using a syntacto-semantic parsing approach”, in: Proceedings of the BioNLP 2013, Sofia, Bulgaria, August 2013
- D. Sonntag, S. Zillner, C. Schulz, M. Weber, T. Toyama: “Towards Medical Cyber-Physical Systems: Multimodal Augmented Reality for Doctors and Knowledge Discovery about Patients”, in: Proceedings of the 15th International Conference on Human-Computer Interaction (HCI International 2013), Las Vegas, Nevada, USA, July 2013
- H. Oberkampf, S. Zillner, B. Bauer, M. Hammon: ”An OGMS-based Model for Clinical Information”, in: Proceedings of the International Conference on Biomedical Ontolo-gies (ICBO) 2013, Montreal, Canada, July 2013
- A. Müller, I.P. Hofmann, H. Oberkampf, S. Zillner: “Knowledge Engineering Require-ments for Generic Diagnostic Systems”, in: Proceedings of the 4th International Con-ference on Knowledge Engineering and Ontology Development (KEOD 2012), Barcelona, Spain, September 2012
- H. Oberkampf, S. Zillner, B. Bauer, M. Hammon: Towards a Ranking of Likely Diseases in Terms of Precision and Recall, in: Proceedings of the ECA Workshop NetMed-2012, Montpellier, France, August 2012
- D. Sonntag, J. Setz, M. Ahmed-Baker, S. Zillner: “Clinical Trial Search With Ad Hoc Interactive Ontology Alignments”, in: Proceedings of the Extended Semantic Web Conference (ESWC 2012), Heraklion, Greece, June 2012
- H. Oberkampf, S. Zillner, B. Bauer, M. Hammon: „Interpreting Patient Data using Medical Background Knowledge, in: Proceedings of the International Conference on Biomedical Ontologies (ICBO) 2012, Graz, Austria, July 2012
- S. Zillner: “Using Image Metadata for Automatic Patient Staging in Lymphoma”, in: Proceedings of the 12th IEEE International Conference on Information (IEEE IRI HI), Las Vegas, USA, August 2011
- S. Zillner, D. Sonntag: “Aligning Medical Ontologies by Axiomatic Models, Corpus Linguistic Syntactic Rules and Context Information”, in: Proceedings of the 24th Inter-national Symposium on Computer-based Medical Systems (CMBS), Bristol, UK, June, 2011
- S. Seifert, S. Zillner, M. Huber, M. Sintek, D. Sonntag, A. Cavallaro: Intelligente Suche in medizinischen Bildern, in: Proceedings of the Acatech Symposium “Internet der Dienste”, Berlin, Germany, September 2010
- S. Zillner: “Reasoning-based Patient Classification for Enhanced Medical Image Annotations”, in: Proceedings of the Extended Semantic Web Conference (ESWC 2010), Heraklion, Greece, June 2010
- D. Sonntag, P. Wennerberg, S. Zillner: “Applications of an Ontology Engineering Methodology Accessing Linked Data for Medical Image Retrieval”, in: Proceedings of the AAAI Spring Symposium “Linked Data Meets Artificial Intelligence”, Stanford, USA, March 2010
- S. Zillner: “Towards the Ontology-based Classification of Lymphoma Patients using Semantic Image Annotations”, in: CEUR Proceedings of SWAT4LS Semantic Web Applications and Tools for Life Sciences (SWAT4LS), Amsterdam, Netherland, November 2009
- S. Zillner: “Collaborative Meta-Modelling of Multi-Domain Innovation Projects”, in: Proceedings of ISWC Workshop on Collaborative Construction, Management and Linking of Unstructured Knowledge, Washington D.C, USA, October 2009
- S. Paradies, S. Zillner, M. Skubacz: “Towards collaborative Strategy Content Management using Ontologies”, in: Proceedings of ISWC Workshop on Collaborative Construction, Management and Linking of Unstructured Knowledge, Washington D.C, USA, October 2009
- P. Wennerberg, P. Buitelaar, S. Zillner: “Deriving Clinical Query Patterns from Medical Corpora Using Domain Ontologies”, in: Proceedings of the Workshop Biomedical Information Extraction, Borovets, Bulgaria, September 2009
- P. Wennerberg, S. Zillner: “Towards Context Driven Modularization of Large Biomedical Ontologies“, in: Proceedings of the International Conference of Biomedical Ontol-ogy (ICBO2009), Buffalo, New York, July 2009
- S. Zillner: “Managing Innovation in Technology Projects: The Challenge of Coopetition in multi-domain settings”, in: Proceedings of the R&D Management Conference, Vienna, Austria, June 2009
- P. Wennerberg, S. Zillner, P. Buitelaar: “Interactive Clinical Query Derivation and Evaluation”, in: Proceedings of the AAAI Spring Symposium on Techno-social Predictive Analytics, Stanford, USA, March 2009
- T. Hauer, D. Rogulin, S. Zillner, A. Branson, J. Shamdasani, A. Tsymbal, M. Huber, T. Solomonides, and R. McClatchey: “An architecture for semantic navigation and reasoning with patient data – experiences of the Health-e-Child project”, in: Proceedings of the 7th International Semantic Web Conference (ISWC), Karlsruhe, Germany, Octo-ber 2008
- P. Wennerberg, S. Zillner, M. Moeller, P. Buitelaar and M. Sintek: “KEMM: A Knowledge Engineering Methodology in the Medical Domain”, in: Proceedings of the 5th International Conference on Formal Ontology in Information Systems (FOIS). Saarbrücken, Germany, October 2008
- P. Wennerberg and S. Zillner: “Semantic Technologies for Advanced Medical Image and Information Search”, in: Proceeding of the European Semantic Technology Conference (ESTC), Vienna, Austria, September 2008
- X. S. Zhou, S. Zillner, M. Moeller, M. Sintek, Y. Zhan, A. Krishnan, and A. Gupta: “Semantics and CBIR: A Medical Imaging Perspective”, in: Proceedings of the ACM International Conference on Image and Video Retrieval, Niagara Falls, Canada, July 2008
- P. Buitelaar, P. Wennerberg, S. Zillner: “Statistical Term Profiling for Query Pattern Mining”. In Proceedings of ACL 2008 BioNLP Workshop (ACL’2008). Columbus, Ohio, USA, June 2008
- S. Zillner, T. Hauer, D. Rogulin, A. Tsymbal, M. Huber, and T. Solomonides: “Semantic Visualization of Patient Information”, in: Proceedings of the 21th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2008), Jyväskylä, Finland, June 2008
- R. Berlanga, E. Jimenez-Ruiz, V. Nebot, D. Manset, A. Branson, T. Hauer, R. McClatchey, D. Rogulin, J. Shamdasani, S. Zillner and J. Freund: “Medical Data Integration and the Semantic Annotation of Medical Protocols”, in: Proceedings of the 21th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2008), Jyväskylä, Finland, June 2008
- P. Wennerberg, P. Buitelaar, S. Zillner: “Towards a Human Anatomy Data Set for Que-ry Pattern Mining based on Wikipedia and Domain Semantic Resources”, in: Proceedings of a Workshop on Building and Evaluating Resources for Biomedical Text Mining (LREC’2008). Marrakech, Morocco, May 2008
- A. Tsymbal, M. Huber, S. Zillner, T. Hauer: “Visualizing Patient Similarity in Clinical Decision Support”. LWA 2007
- A. Tsymbal, S. Zillner, and M. Huber: “Ontology – Supported Machine Learning and Decision Support in Biomedicine”, in: Proceedings of the Fourth International Work-shop Data Integration in Life Sciences, Philadelphia, USA, June 2007
- A. Tsymbal, S. Zillner, and M. Huber: “Feature Ontology for Improved Learning from Large-Dimensional Disease-Specific Heterogeneous Data”, in: Proceedings of the Twentieth IEEE International Symposium on Computer-Based Medical Systems, Maribor, Slovenia, June 2007
- S. Zillner, B. Haslhofer, and W. Winiwarter: “The Design and Implementation of a Query Algebra for Multimedia Meta Objects”, in: Proceedings of the Fourth International Workshop on Web Semantics, Copenhagen, Denmark, August 2005
- S. Zillner and W. Winiwarter: “Integrating Ontology Knowledge into a Query Algebra for Multimedia Meta Objects”, in: Proceedings of the Fifth International Conference on Web Information Systems Engineering, Brisbane, Australia, November 2004
- S. Zillner, U. Westermann, and W. Winiwarter: “EMMA: A Query Algebra for Enhanced Multimedia Meta Objects”, in: Proceedings of the International Conference on Ontologies, Databases and Applications of Semantics, Larnaca, Cyprus, October 2004
- S. Zillner and W. Winiwarter: “Ontology-Based Query Refinement for Multimedia Me-ta Objects”, in: Proceedings of the Sixth International Conference on Information Integration and Web Based Applications and Services, Jakarta, Indonesia, September, 2004
- S. Zillner, U. Westermann, and W. Winiwarter: “EMMA: Towards a Query Algebra for Enhanced Multimedia Meta Objects”, in: Proceedings of the Fourth International Conference on Computer and Information Technology, Wuhan, China, September 2004
- K. Schellner, U. Westermann, S. Zillner, and W. Klas: “CULTOS: Towards a World-Wide Digital-Collection of Exchangeable Units of Multimedia Content for Intertextual Studies”, in: Proceedings of the International Conference on Distributed Multimedia Systems, Florida, September 2003
- S. Zillner, M. Gelautz, and M. Kallinger: “The Right Move – A Concept for a Video-Based Choreography Tool”. Conference on Photogrammatic Computer Vision, Graz, Austria, August 2002
Book Chapters and Contributions
- U. Hohenstein, A. Biesdorf, S. Zillner: Architectural Considerations for a Data Access Marketplace, in: Proceedings of the 7th International Conference on Data Science, Technology and Applications DATA, Porto, Portugal, July 2018
- C. Bretschneider, S. Zillner, M. Hammon, P. Gass, D. Sonntag: Automatic extraction of breast cancer information from clinical reports. In Proceedings of 30th International Symposium on Computer-Based Medical Systems, Thessaloniki, Greece, June 2017
- M. Barz, P. Poller, M. Schneider, S. Zillner, D. Sonntag: Human-in-the-Loop Control Processes in Industry 4.0 Factories. In Proceedings of 8th International Conference on Industrial Applications of Holonic and Multi-Agent Systems (HoloMAS2017), Lyon, France, August 2017
- D. Panfilenko, P. Poller, D. Sonntag, S. Zillner, M. Schneider: BPMN for Knowledge Acquisition and Anomaly Handling in CPS for Smart Factories, in: Proceedings of the IEEE International Conference on Emerging Technology & Factory Automation to be held in Berlin, Germany (ETFA 2016), September 6 – 9, 2016
- S. Zillner, A. Ebel, M. Schneider: Towards intelligent manufacturing, semantic modeling for the steel industry, in: Proceedings of the 17th IFAC Symposium on Control, Optimization and Automation in Mining, Mineral and Metal Processing, Vienna, Austria, 2016
- C. Bretschneider, H. Oberkampf, S. Zillner: UIMA2LOD: Integrating UIMA Text An-notations into the Linked Open Data Cloud. In proceedings of the International Conference on Knowledge Engineering and Semantic Web. Moscow, Russia, 2015 (First Pa-per Award)
- C. Bretschneider, S. Zillner: Semantic Splitting of German Medical Compounds, in: P. Král and V. Matoušek (editors): Lecture Notes in Computer Science – Text, Speech, and Dialogue, Springer International Publishing, 2015
- H. Oberkampf, T. Gojayev, S. Zillner, D. Zühlke, S. Auer, M. Hammon: ”From Symptoms to Diseases – Creating the Missing Link”, in: Proceedings of the 12th Extended Semantic Web Conference (ESWC 2015), Portoroz, Slovenia, June 2015
- D. Sonntag, V. Tresp, S. Zillner, A. Cavallaro, M. Hammon, A. Reis, P. Fasching, M. Sedlmayr, T. Ganslandt, H.-U. Prokosch, K. Budde, D. Schmidt, C. Hinrichs, T. Wit-tenberg, P. Daumke, und G. Patricia: “The Clinical Data Intelligence Project”, in: Journal Informatik-Spektrum, Springer Verlag, 2015
- S. Zillner, H. Oberkampf, C. Bretschneider, A. Zaveri and S. Neururer: Towards a Roadmap for Big Data Applications in the Healthcare Domain. In Proceeding of 12th IEEE International Conference on Information and Integration (IEEE IRI HI), San Francisco. USA, August 2014
- C. Bretschneider, H. Oberkampf, S. Zillner, B. Bauer and M Hammon: Corpus-based Translation of Ontologies for Improved Multilingual Semantic Annotation, in: Proceedings of the Workshop Semantic Web and Information Extraction Workshop (SWAIE 2014), Dublin, Ireland, August 2014
- H. Oberkampf, C. Bretschneider, S. Zillner, B. Bauer, M. Hammon: ”Knowledge-based Extraction of Measurement-Entity Relations from Radiology Reports”, in: Proceedings of the IEEE International Conference on Healthcare Informatics 2014 (ICHI 2014, Verona, Italy, September 2014
- S. Zillner, N. Lasierra, W. Faix, and S. Neururer: User Needs and Requirements Analysis for Big Data Healthcare Applications, in: Proceeding of the 25th European Medical Informatics Conference (MIE 2014), Istanbul, Turkey, September 2014
- D. Sonntag, S. Zillner, S. Chakraborty, A. Lorincz, E. Strömmer, L. Serafini: The Med-ical Cyber-Physical Systems Activity at EIT: A Look under the Hood, in: Proceedings of the 27th International Symposium of Computer-Based Medical Systems (IEEE CBMS 2014), New York, USA, May 2014
- S. Zillner, A. Ebel, M. Schneider, L.Abele, G. Mathis, N. Goldenberg: A semantic modelling approach for the steel production domain, in: Proceedings of the 1st Europe-an Steel Technology & Application Days (ESTAD), Paris, France, April 2014 (forth-coming)
- V. Tresp, S. Zillner, M. J. Costa, Y. Huang, et al.: Towards a New Science of a Clinical Data Intelligence, in: Proceedings of the NIPS Workshop on Machine Learning for Clinical Data Analytics and Healthcare, Lake Tahoe, Nevada, USA, December 2013
- C. Bretschneider, S. Zillner, M. Hammon: „Grammar-based lexicon enhancement for aligning German radiology text and images”, in: Proceedings of the Recent Advances in Natural Language Processing (RANLP 2013), Hissar, Bulgaria, September 2013
- C. Bretschneider, S. Zillner, M. Hammon: „Identifying pathological findings in Ger-man radiology reports using a syntacto-semantic parsing approach”, in: Proceedings of the BioNLP 2013, Sofia, Bulgaria, August 2013
- D. Sonntag, S. Zillner, C. Schulz, M. Weber, T. Toyama: “Towards Medical Cyber-Physical Systems: Multimodal Augmented Reality for Doctors and Knowledge Discovery about Patients”, in: Proceedings of the 15th International Conference on Human-Computer Interaction (HCI International 2013), Las Vegas, Nevada, USA, July 2013
- H. Oberkampf, S. Zillner, B. Bauer, M. Hammon: ”An OGMS-based Model for Clinical Information”, in: Proceedings of the International Conference on Biomedical Ontolo-gies (ICBO) 2013, Montreal, Canada, July 2013
- A. Müller, I.P. Hofmann, H. Oberkampf, S. Zillner: “Knowledge Engineering Require-ments for Generic Diagnostic Systems”, in: Proceedings of the 4th International Con-ference on Knowledge Engineering and Ontology Development (KEOD 2012), Barcelona, Spain, September 2012
- H. Oberkampf, S. Zillner, B. Bauer, M. Hammon: Towards a Ranking of Likely Diseases in Terms of Precision and Recall, in: Proceedings of the ECA Workshop NetMed-2012, Montpellier, France, August 2012
- D. Sonntag, J. Setz, M. Ahmed-Baker, S. Zillner: “Clinical Trial Search With Ad Hoc Interactive Ontology Alignments”, in: Proceedings of the Extended Semantic Web Conference (ESWC 2012), Heraklion, Greece, June 2012
- H. Oberkampf, S. Zillner, B. Bauer, M. Hammon: „Interpreting Patient Data using Medical Background Knowledge, in: Proceedings of the International Conference on Biomedical Ontologies (ICBO) 2012, Graz, Austria, July 2012
- S. Zillner: “Using Image Metadata for Automatic Patient Staging in Lymphoma”, in: Proceedings of the 12th IEEE International Conference on Information (IEEE IRI HI), Las Vegas, USA, August 2011
- S. Zillner, D. Sonntag: “Aligning Medical Ontologies by Axiomatic Models, Corpus Linguistic Syntactic Rules and Context Information”, in: Proceedings of the 24th Inter-national Symposium on Computer-based Medical Systems (CMBS), Bristol, UK, June, 2011
- S. Seifert, S. Zillner, M. Huber, M. Sintek, D. Sonntag, A. Cavallaro: Intelligente Suche in medizinischen Bildern, in: Proceedings of the Acatech Symposium “Internet der Dienste”, Berlin, Germany, September 2010
- S. Zillner: “Reasoning-based Patient Classification for Enhanced Medical Image Annotations”, in: Proceedings of the Extended Semantic Web Conference (ESWC 2010), Heraklion, Greece, June 2010
- D. Sonntag, P. Wennerberg, S. Zillner: “Applications of an Ontology Engineering Methodology Accessing Linked Data for Medical Image Retrieval”, in: Proceedings of the AAAI Spring Symposium “Linked Data Meets Artificial Intelligence”, Stanford, USA, March 2010
- S. Zillner: “Towards the Ontology-based Classification of Lymphoma Patients using Semantic Image Annotations”, in: CEUR Proceedings of SWAT4LS Semantic Web Applications and Tools for Life Sciences (SWAT4LS), Amsterdam, Netherland, November 2009
- S. Zillner: “Collaborative Meta-Modelling of Multi-Domain Innovation Projects”, in: Proceedings of ISWC Workshop on Collaborative Construction, Management and Linking of Unstructured Knowledge, Washington D.C, USA, October 2009
- S. Paradies, S. Zillner, M. Skubacz: “Towards collaborative Strategy Content Management using Ontologies”, in: Proceedings of ISWC Workshop on Collaborative Construction, Management and Linking of Unstructured Knowledge, Washington D.C, USA, October 2009
- P. Wennerberg, P. Buitelaar, S. Zillner: “Deriving Clinical Query Patterns from Medical Corpora Using Domain Ontologies”, in: Proceedings of the Workshop Biomedical Information Extraction, Borovets, Bulgaria, September 2009
- P. Wennerberg, S. Zillner: “Towards Context Driven Modularization of Large Biomedical Ontologies“, in: Proceedings of the International Conference of Biomedical Ontol-ogy (ICBO2009), Buffalo, New York, July 2009
- S. Zillner: “Managing Innovation in Technology Projects: The Challenge of Coopetition in multi-domain settings”, in: Proceedings of the R&D Management Conference, Vienna, Austria, June 2009
- P. Wennerberg, S. Zillner, P. Buitelaar: “Interactive Clinical Query Derivation and Evaluation”, in: Proceedings of the AAAI Spring Symposium on Techno-social Predictive Analytics, Stanford, USA, March 2009
- T. Hauer, D. Rogulin, S. Zillner, A. Branson, J. Shamdasani, A. Tsymbal, M. Huber, T. Solomonides, and R. McClatchey: “An architecture for semantic navigation and reasoning with patient data – experiences of the Health-e-Child project”, in: Proceedings of the 7th International Semantic Web Conference (ISWC), Karlsruhe, Germany, Octo-ber 2008
- P. Wennerberg, S. Zillner, M. Moeller, P. Buitelaar and M. Sintek: “KEMM: A Knowledge Engineering Methodology in the Medical Domain”, in: Proceedings of the 5th International Conference on Formal Ontology in Information Systems (FOIS). Saarbrücken, Germany, October 2008
- P. Wennerberg and S. Zillner: “Semantic Technologies for Advanced Medical Image and Information Search”, in: Proceeding of the European Semantic Technology Conference (ESTC), Vienna, Austria, September 2008
- X. S. Zhou, S. Zillner, M. Moeller, M. Sintek, Y. Zhan, A. Krishnan, and A. Gupta: “Semantics and CBIR: A Medical Imaging Perspective”, in: Proceedings of the ACM International Conference on Image and Video Retrieval, Niagara Falls, Canada, July 2008
- P. Buitelaar, P. Wennerberg, S. Zillner: “Statistical Term Profiling for Query Pattern Mining”. In Proceedings of ACL 2008 BioNLP Workshop (ACL’2008). Columbus, Ohio, USA, June 2008
- S. Zillner, T. Hauer, D. Rogulin, A. Tsymbal, M. Huber, and T. Solomonides: “Semantic Visualization of Patient Information”, in: Proceedings of the 21th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2008), Jyväskylä, Finland, June 2008
- R. Berlanga, E. Jimenez-Ruiz, V. Nebot, D. Manset, A. Branson, T. Hauer, R. McClatchey, D. Rogulin, J. Shamdasani, S. Zillner and J. Freund: “Medical Data Integration and the Semantic Annotation of Medical Protocols”, in: Proceedings of the 21th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2008), Jyväskylä, Finland, June 2008
- P. Wennerberg, P. Buitelaar, S. Zillner: “Towards a Human Anatomy Data Set for Que-ry Pattern Mining based on Wikipedia and Domain Semantic Resources”, in: Proceedings of a Workshop on Building and Evaluating Resources for Biomedical Text Mining (LREC’2008). Marrakech, Morocco, May 2008
- A. Tsymbal, M. Huber, S. Zillner, T. Hauer: “Visualizing Patient Similarity in Clinical Decision Support”. LWA 2007
- A. Tsymbal, S. Zillner, and M. Huber: “Ontology – Supported Machine Learning and Decision Support in Biomedicine”, in: Proceedings of the Fourth International Work-shop Data Integration in Life Sciences, Philadelphia, USA, June 2007
- A. Tsymbal, S. Zillner, and M. Huber: “Feature Ontology for Improved Learning from Large-Dimensional Disease-Specific Heterogeneous Data”, in: Proceedings of the Twentieth IEEE International Symposium on Computer-Based Medical Systems, Maribor, Slovenia, June 2007
- S. Zillner, B. Haslhofer, and W. Winiwarter: “The Design and Implementation of a Query Algebra for Multimedia Meta Objects”, in: Proceedings of the Fourth International Workshop on Web Semantics, Copenhagen, Denmark, August 2005
- S. Zillner and W. Winiwarter: “Integrating Ontology Knowledge into a Query Algebra for Multimedia Meta Objects”, in: Proceedings of the Fifth International Conference on Web Information Systems Engineering, Brisbane, Australia, November 2004
- S. Zillner, U. Westermann, and W. Winiwarter: “EMMA: A Query Algebra for Enhanced Multimedia Meta Objects”, in: Proceedings of the International Conference on Ontologies, Databases and Applications of Semantics, Larnaca, Cyprus, October 2004
- S. Zillner and W. Winiwarter: “Ontology-Based Query Refinement for Multimedia Me-ta Objects”, in: Proceedings of the Sixth International Conference on Information Integration and Web Based Applications and Services, Jakarta, Indonesia, September, 2004
- S. Zillner, U. Westermann, and W. Winiwarter: “EMMA: Towards a Query Algebra for Enhanced Multimedia Meta Objects”, in: Proceedings of the Fourth International Conference on Computer and Information Technology, Wuhan, China, September 2004
- K. Schellner, U. Westermann, S. Zillner, and W. Klas: “CULTOS: Towards a World-Wide Digital-Collection of Exchangeable Units of Multimedia Content for Intertextual Studies”, in: Proceedings of the International Conference on Distributed Multimedia Systems, Florida, September 2003
- S. Zillner, M. Gelautz, and M. Kallinger: “The Right Move – A Concept for a Video-Based Choreography Tool”. Conference on Photogrammatic Computer Vision, Graz, Austria, August 2002